Review

3d structure (Accelrys)

About

News

Press Release

Team

Advisors

Partners

Contact

Bioz Stars

Bioz vStars

Buy from Supplier

Structured Review

Accelrys 3d structure
3d Structure, supplied by Accelrys, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/3d+structure/3d+structure/pmc13116262-265-1-16
Average 86 stars, based on 1 article reviews

3d structure - by Bioz Stars, 2026-11

86/100 stars

Images

other:

Article Title: Design of Dipeptite-Based Organogelators as Separators of Cationic Dye Cyristal Violet from Water
Article Snippet: The 3D structure of the decamer of LLEP was obtained from its 2D structure drawn by BIOVIA Draw 2019 [ ].

Article Title: Protein kinases: docking and homology modeling reliability.
Article Snippet: Dipartimento di Scienze Farmaceutiche, Università di Pisa, via Bonanno 6, 56126 Pisa, Italy, Department of Biology, Sbarro Institute for Cancer Research and Molecular Medicine, Center for Biotechnology, College of Science and Technology, Temple University, Philadelphia, Pennsylvania 19122, Dipartimento Farmaco Chimico Tecnologico, Universita‘ degli Studi di Siena, Via De Gasperi 2, 53100 Siena, Italy

Article Title: Identification of potential AMPK activator by pharmacophore modeling, molecular docking and QSAR study.
Article Snippet: AMP-activated protein kinase (AMPK) plays a major role in maintaining cellular energy homeostasis by sensing and responding to AMP/ADP concentrations relative to ATP.. AMPK has attracted widespread attention as a potential therapeutic target for metabolic diseases such as cancer and cardiovascular diseases.. The structure-based 3D pharmacophore model was developed based on the training set.

Generated:

Article Title: In-vitro and in-silico therapeutic investigation and biochemical characterization of Mangifera indica: A flowering plant
Article Snippet: The receptor structure was then stabilized by removing the attached ligands, water molecules and other impurities with the use of BIOVIA Discovery Studio 2020 software (https://discover.3ds.com/discoverystudio-visualizer-download/) .. The 3D structure generated from the BIOVIA software then gone through various quality analyses using SAVES 6.0 (https://saves.mbi.ucla.edu/) by ERRAT, PROCHECK [26, 27]. .. AutoDock Vina software (http://vina.scripps.edu/) [28] for molecular docking and virtual screening that significantly improves efficient binding mode predictions, thereafter gives more accuracy in protein-ligand interaction.

Article Title: An insight to the binding of ellagic acid with human serum albumin using spectroscopic and isothermal calorimetry studies
Article Snippet: .. The 3D structure of EA was generated and energy minimized by the Accelrys DS Visualizer2.0 and saved as PDB files . .. We have used these 3D models for docking based binding studies using Autodock 4 , .

Article Title: Structure-based modelling in reproductive toxicology: (Q)SARs for the placental barrier.
Article Snippet: Taylor & Francis makes every effort to ensure the accuracy of all the information (the “Content”) contained in the publications on our platform.. However, Taylor & Francis, our agents, and our licensors make no representations or warranties whatsoever as to the accuracy, completeness, or suitability for any purpose of the Content.. Any opinions and views expressed in this publication are the opinions and views of the authors, and are not the views of or endorsed by Taylor & Francis.

Real-time Polymerase Chain Reaction:

Article Title: Robinin decreases myocardial ischemia/reperfusion injury via Nrf2 anti-oxidative effects mediated by Akt/GSK3β/Fyn in hypercholesterolemic rats.
Article Snippet: The preliminary docking investigation was conducted using Autodock Vina (version 1.5.6). .. The 3D structure (Biovia Dassault system, Inc., USA) was viewed using Discovery Studio Version 4.5, which also removed the water molecule's interaction Table 1 Primer sequences used in real-time PCR assays Primers Sequences Akt 5′ T G G A C T A C C T G C A C T C G G A G A A -3′ 5′ G T G C C G C A A A A G G T C T T C A T G G-3′ GSK-3β 5′ C C G A C T A A C A C C A C T G G A A G C T-3′ 5′ A G G A T G G T A G C C A G A G G T G G A T-3′ NQO-1 5′ C C T G C C A T T C T G A A A G G C T G G T-3′ 5′ G T G G T G A T G G A A A G C A C T G C C T-3′ HO-1 5′- C C A G G C A G A G A A T G C T G A G T T C-3′ 5′- A A G A C T G G G C T C T C C T T G T T G C-3 Nrf-2 5′ C A C A T C C A G T C A G A A A C C A G T G G 3′ 5′ G G A A T G T C T G C G C C A A A A G C T G-3′ n-Fyn 5′ C T G G T C A C C A A A G G A A G A G T G C-3′ 5′ G G T C C T T T T T C C A G C A G T G G A T C-3′ GAPDH 5′GAC GGC CGC ATC TTC TTG T-3′ 5′ CAC ACC GAC CTT CAC CAT TTT3′ 1 3 301 Page 4 of 18 Journal of Molecular Histology (2025) 56:301 ..